General Papers
eMonocot - A successful virtual community | |
Annapaola Santarsiero, Benjamin Clark, Joseph Kelly, Charles Godfray |
A taxonomist's guide to Homo sapiens computans | |
David King |
Streamlining material- and data flow within the German Barcode of Life Project, GBOL | |
Christian Köhler, Peter Grobe |
Miss the forest for the trees: bringing together multiple classifications | |
Heimo Rainer, Wolfgang Koller |
SeaIce: a Cross-Domain Crowd-Sourced Metadata Vocabulary | |
John Kunze, Jane Greenberg, Sarah Callaghan, Robert Guralnick, Greg Janee, Angela Murillo, Nassib Nassar, Christopher Patton, Karthik Ram, Jim Regetz, Tim Robertson |
Posters
Bibliography of Life: Comprehensive services for biodiversity bibliographic references | |
David King, Guido Sautter, David Morse, Lyubomir Penev, Jordan Biserkov, Teodor Georgiev, Dave Roberts, Vince Smith |
PlutoF – multifunctional workbench for taxonomical and ecological research, biodiversity data collection and analysis | |
Kessy Abarenkov, Urmas Kõljalg, Marko Peterson, Siim Halapuu, Janno Jõgeva, Karl Ranna, Henrik Nilsson |
eBiodiversity – web portal for Estonian biodiversity data | |
Marko Peterson, Urmas Kõljalg, Kessy Abarenkov, Veljo Runnel, Siim Halapuu, Janno Jõgeva, Karl Ranna |
Practical Use and Database Quality Control of the Korea National Biospecies Information System | |
Sangyong KIM, Jae-Hyeun KIM, You-Mi LEE, Joon-Hwan SHIN |
From Dendrœca blackburniæ to Dendrceca blackburniae: what's in a name? | |
David King |
Fauna Europaea; all European animal species on the web | |
Yde de Jong, Florian Wetzel, Falko Gloeckler, Alexander Kroupa, Andreas Kohlbecker, Andreas Müller, Anton Guentsch, Gregor Hagendorn, Christoph Haueser |
Lets talk: technical infrastructure and workflows for the OpenUp! Common Names Service | |
Wolfgang Koller, Heimo Rainer |
agINFRA - where agriculture, biodiversity and information technology meet | |
David Morse, Jane Bromley, David King |
Linking taxon names with DNA-based species | |
Urmas Kõljalg |
Plinian Core: integrating information about species | |
Santiago Martínez de la Riva, Carmen Quesada, Francisco Pando de la Hoz, Bárbara Ayala-Orozco, Ángela M. Suárez-Mayorga, María Mora, Danny Vélez, Jose Trinidad Mendoza Gaytan, Daniel Lins da Silva, Patricia Koleff, Maria Esther Quintero Rivero, Aurelio Sanabria |
Lets talk: accessing scientific content through their vernacular names representations | |
Heimo Rainer, Wolfgang Koller |
Building a mass-digitisation service infrastructure and user communities | |
Hannu Saarenmaa, Tero Mononen, Janne Karppinen, Mira Sääskilahti, Riitta Tegelberg |
ComTax: Community-driven Curation for Taxonomic Databases | |
David Morse, Hui Yang, Alistair Willis, Anne de Roeck, David King |
The DINA-Specify Consortium | |
Fredrik Ronquist, Markus Englund, Karin Karlsson, Kevin Holston, Ida Li |
Biodiversity Network of the Humboldt-Ring (BiNHum): Access to high-quality object data, extension of established database systems and set-up of a joint data portal | |
Joerg Lange, Joachim Holstein, Anita Roth-Nebelsick, Christopher Traiser, Florian Raub, Hubert Höfer, Klaus Riede, Peter Grobe, Maik Röder, Christian Köhler, Anton Güntsch, Gabriele Dröge, Patricia Kelbert, Dagmar Triebel, Anton Link, Markus Weiss, Dieter Neubacher, Tanja Weibulat |
Miss the forest for the trees: technical infrastructure for handling multiple classifications | |
Wolfgang Koller, Heimo Rainer |
Anymals + plants – Biodiversity in your pocket | |
Falko Glöckler, Alexander Krupa, Daniel Zitterbart, M. Uher, Tom Uher |
Symposium: Empowering International e-Collaboration for Sustainability
Introduction: Empowering International eCollaboration for Sustainability | |
Deborah Paul, Gail Kampmeier, Reed Beaman |
Use it or lose it: Crowdsourcing support and outreach activities in a hybrid sustainability model for e-infrastructures – The ViBRANT project case studies | |
Dimitrios Koureas, Laurence Livermore, Dave Roberts, Vincent Smith |
Creating a semantic framework for cultivated plants for the international e-collaboration on agrobiodiversity | |
Elizabeth Arnaud, Luca Matteis, Pankaj Jaiwal, Laurel Cooper, Selim Louafi, Pierre Larmande, Caterina Caraciolo, Johannes Keizer, Richard Bruskiewich |
Panel Discussion: Empowering International eCollaboration for Sustainability | |
Reed S. Beaman, Deborah Paul, Gail Kampmeier |
Symposium Biodiversity informatics services and workflows
Provenance in Scientific Workflows: Challenges and Opportunities for Biodiversity Informatics | |
Bertram Ludaescher, Paolo Missier, David Lowery, Tianhong Song, Maureen Kelly, Sven Koehler, James Macklin, Paul Morris, Robert Morris, James Hanken |
Improving Natural Science Collections Data through Quality Control for Research using Workflows Embedded in a FilteredPush network | |
James A Macklin, James Hanken, Maureen Kelly, Sven Koehler, David B Lowery, Bertram Ludaescher, Paul J Morris, Robert A Morris, Tianhong Song |
Symposium: Biodiversity Data Quality – issues, methods and tools
VESpeR - Visual Exploration of Species-referenced Repositories | |
Martin Graham, Jessie Kennedy |
A Data Quality Management Module for BExIS | |
Michael Owonibi, Roman Gerlach, Andreas Ostrowski, Eleonora Petzold, Birgitta König-Ries |
Symposium: Crafting the future of a Global Biodiversity Heritage Library for diverse community’s needs
A Current Overview of the Biodiversity Heritage Library | |
Martin R. Kalfatovic |
Questions & Discussion: Crafting the future of a Global Biodiversity Heritage Library for diverse community’s needs: the case of scientists. | |
Martin Kalfatovic |
Semantics for Biodiversity - Technologies, Reasoning and Annotation
Building a Biodiversity Information Network using Persistent, Resolvable Identifiers | |
John Deck, Robert Guralnick, John Kunze |
Semantic matching of interests to annotations with SPARQL queries on reasoned triples | |
Paul J Morris, James Hanken, Maureen Kelly, David Lowery, Bertram Ludäscher, James A. Macklin, Robert A Morris, Tianhong Song |
Semantic approach for collection data via open data webs instead of closed systems | |
Falko Glöckler, Alexander Kroupa, Anton Güntsch, Gregor Hagedorn |
Semantics for Biodiversity - Interoperability with Genomic and Environmental semantics
User-Based Sub-Ontology Extraction – A Means to Support Semantic Annotation of Biodiversity Data | |
Dennis Heimann, Birgitta König-Ries |
The Earth Microbiome Project: Planetary-scale systems ecology. | |
Sean Gibbons, Jack Gilbert, Rob Knight, Janet Jansson, Jai Rideout, Antonio Gonzales, Emmanuel Prestat, J Gregory Caporaso |
Symposium: Mobilizing biodiversity information in Sub-Saharan Africa
A bioinformatics journey towards biodiversity information availability and use in Rwanda | |
Prosper Karame |
Symposium: Developing a Names-based Architecture for Linking Biodiversity Data
Dynamics of taxon concepts: How to handle changes of taxonomic information, and why? | |
Oskar Kindvall |
Concepts and Tools Needed to Increase Bottom-Up Taxonomic Expert Participation in a Global Names-Based Infrastructure | |
Nico Franz, David Patterson, Sudhir Kumar, Edward Gilbert |
Design of "LODAC Species" as a Names-based Linked Open Data architecture | |
Akihiro Kameda, Fumihiro Kato, Utsugi Jimbo, Ikki Ohmukai, Hideaki Takeda |
The EDIT Platform for Cybertaxonomy as an information broker in name infrastructures | |
Andreas Kohlbecker, Yde de Jong, Cherian Mathew, Lorna Morris, Andreas Müller, Anton Güntsch, Walter Berendsohn |
Scratchpads: The virtual research environment for biodiversity data | |
Simon Rycroft, Dave Roberts, Vince Smith, Alice Heaton, Katherine Bouton, Laurence Livermore, Dimitris Koureas, Ed Baker |
A pan-European Species-directories Infrastructure (PESI) | |
Yde de Jong, Florian Wetzel, Gregor Hagendorn, Falko Gloeckler, Christoph Haeuser, Marc Geoffroy, Eckhard von Raab-Straube, Anton Guentsch, Walter Berendsohn, Nicola Nicolson, Alan Paton, Paul Kirk, Bart Vanhoorne, Simon Claus, Francisco (Tjess) Hernandez, Jan Mees, Christos Arvanitidis, Hannu Saarenmaa, Valerio Sbordoni, Aaike De Wever, Hendrik Segers, Ulf Gärdenfors, David King |
In the hot seat: managing data- and workflows between biologists and computers | |
Dmitry Schigel, Hanna Koivula, Esko Piirainen, Eija-Leena Laiho |
Symposium: Scholarly Data Publishing in Biodiversity: Challenges and Potentials
Next generation sequencing requires next generation publishing: The Biodiversity Data Journal published the first Eukaryotic new species with a fully sequenced transcriptome, DNA barcode and microcomputed tomography | |
Lyubomir Penev, Pavel Stoev, Ana Komericki, Nesrine Akkari, Shalini Li, Xin Zhou, Scott Edmunds, Chris Hunter, Alexander Weigand, David Porco, Marzio Zapparoli, Teodor Georgiev, Daniel Mietchen, Dave Roberts, Vincent Smith |

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