Presentations and Authors


Last name A B C D E F G H I J K L M N O P Q R S T U V W X Y Z All
Track:
 

General Papers

Using ElasticSearch as a fast, flexible, and scalable solution to search occurrence records and checklists
Christian Gendreau, Marie-Elise Lecoq, David P. Shorthouse, Luc Brouillet
Assisted restructure of web content for paper-based presentation: a look at work flows and data representations
Alice Heaton, Simon Rycroft, Ed Baker, Katherine Bouton, Ben Scott, Koureas Dimitris, Laurence Livermore, Dave Roberts, Vince Smith
Xper3: Introducing Social Taxonomy
Thomas Burguiere, Florian Causse, Antoine Bergamaschi, Nils Paulhe, Anais Grand, Frederic Lison, Visotheary Ung, Regine Vignes-Lebbe
The French standard "Occurrence of taxon" : issues, organization and results
Julie Chataigner, Laurent Poncet, Marie-Elise Lecoq, Anne-Sophie Archambeau, Thierry Bourgoin
Coupling phenotype descriptions and phylogenetic trees: from SDD to ontologies via graph databases
Anaïs Grand, Régine Vignes Lebbe, Eduardo Miranda, André Santanchè

Posters

Practical Use and Database Quality Control of the Korea National Biospecies Information System
Sangyong KIM, Jae-Hyeun KIM, You-Mi LEE, Joon-Hwan SHIN
Plinian Core: integrating information about species
Santiago Martínez de la Riva, Carmen Quesada, Francisco Pando de la Hoz, Bárbara Ayala-Orozco, Ángela M. Suárez-Mayorga, María Mora, Danny Vélez, Jose Trinidad Mendoza Gaytan, Daniel Lins da Silva, Patricia Koleff, Maria Esther Quintero Rivero, Aurelio Sanabria
A strategy for integration of big (phenotype) data
Suzanna Lewis, Paula Mabee, Andy Deans, Eva Huala, Chris Mungall
Xper3: Introducing Social Taxonomy
Thomas Burguiere, Florian Causse, Antoine Bergamaschi, Nils Paulhe, Anais Grand, Frederic Lison, Visotheary Ung, Regine Vignes-Lebbe
The DINA-Specify Consortium
Fredrik Ronquist, Markus Englund, Karin Karlsson, Kevin Holston, Ida Li
A High Volume Media Library using TDWG Audubon Core
Wouter Addink, Ayco Holleman, Adrie Berg, Joost van Leusen, Atze de Vries, David Heijkamp
Biodiversity Network of the Humboldt-Ring (BiNHum): Access to high-quality object data, extension of established database systems and set-up of a joint data portal
Joerg Lange, Joachim Holstein, Anita Roth-Nebelsick, Christopher Traiser, Florian Raub, Hubert Höfer, Klaus Riede, Peter Grobe, Maik Röder, Christian Köhler, Anton Güntsch, Gabriele Dröge, Patricia Kelbert, Dagmar Triebel, Anton Link, Markus Weiss, Dieter Neubacher, Tanja Weibulat

Symposium: Empowering International e-Collaboration for Sustainability

Use it or lose it: Crowdsourcing support and outreach activities in a hybrid sustainability model for e-infrastructures – The ViBRANT project case studies
Dimitrios Koureas, Laurence Livermore, Dave Roberts, Vincent Smith
Creating a semantic framework for cultivated plants for the international e-collaboration on agrobiodiversity
Elizabeth Arnaud, Luca Matteis, Pankaj Jaiwal, Laurel Cooper, Selim Louafi, Pierre Larmande, Caterina Caraciolo, Johannes Keizer, Richard Bruskiewich

Symposium Biodiversity informatics services and workflows

Provenance in Scientific Workflows: Challenges and Opportunities for Biodiversity Informatics
Bertram Ludaescher, Paolo Missier, David Lowery, Tianhong Song, Maureen Kelly, Sven Koehler, James Macklin, Paul Morris, Robert Morris, James Hanken
Improving Natural Science Collections Data through Quality Control for Research using Workflows Embedded in a FilteredPush network
James A Macklin, James Hanken, Maureen Kelly, Sven Koehler, David B Lowery, Bertram Ludaescher, Paul J Morris, Robert A Morris, Tianhong Song

Symposium: Minimum Information Standards for Biological Collections: Beyond Darwin Core

Using and Extending Darwin Core for structured attribute data
Cynthia Parr, Patrick Leary, Jennifer Hammock, Katja Schulz, Nathan Wilson

Semantics for Biodiversity - Technologies, Reasoning and Annotation

A faceted search system for facilitating the understanding and the prediction of ecosystem changes
Marie-Angélique Laporte, Eric Garnier, Isabelle Mougenot
Semantic matching of interests to annotations with SPARQL queries on reasoned triples
Paul J Morris, James Hanken, Maureen Kelly, David Lowery, Bertram Ludäscher, James A. Macklin, Robert A Morris, Tianhong Song
SemantEco Annotator for Linked Data Generation and Generalized Semantic Mapping
Patrice Seyed, Katherine Chastain, Brendan Ashby, Yue Liu, Timothy Lebo, Evan Patton, Deborah McGuinness

Semantics for Biodiversity - Formal Models and Ontologies

Using Answer Set Programming to Simulate the Interplay of Taxonomic and Nomenclatural Change
Nico Franz, Joohyung Lee
A Toolkit for Reconciling Multiple Taxonomic Perspectives: Euler/X and the Perelleschus Use Case
Nico Franz, Mingmin Chen, Shizhuo Yu, Shawn Bowers, Bertram Ludäscher

Semantics for Biodiversity - Interoperability with Genomic and Environmental semantics

Semantic tools for aggregation of morphological characters across studies
James Balhoff, Alex Dececchi, Paula Mabee, Hilmar Lapp

Workshop Darwin Core Archives: beyond star schema

Darwin Core Archives and the Encyclopedia of Life
Patrick Leary
Discussion - Darwin Core Archives: beyond star schema
Gabriele Droege, Patrick Leary

Symposium: Developing a Names-based Architecture for Linking Biodiversity Data

Scratchpads: The virtual research environment for biodiversity data
Simon Rycroft, Dave Roberts, Vince Smith, Alice Heaton, Katherine Bouton, Laurence Livermore, Dimitris Koureas, Ed Baker
In the hot seat: managing data- and workflows between biologists and computers
Dmitry Schigel, Hanna Koivula, Esko Piirainen, Eija-Leena Laiho

Workshop: Sharing and delivery of reusable phylogenetic knowledge

Quest for Orthologs: anchoring comparative biology research
Suzanna Lewis, Quest for Orthologs Consortium
Panel Discussion: Sharing & Delivery of Reusable Phylogenetic Knowledge
Hilmar Lapp
Workshop: Sharing & Delivery of Reusable Phylogenetic Knowledge
Rutger Vos, Nico Cellinese, Hilmar Lapp

Symposium: Scholarly Data Publishing in Biodiversity: Challenges and Potentials

Next generation sequencing requires next generation publishing: The Biodiversity Data Journal published the first Eukaryotic new species with a fully sequenced transcriptome, DNA barcode and microcomputed tomography
Lyubomir Penev, Pavel Stoev, Ana Komericki, Nesrine Akkari, Shalini Li, Xin Zhou, Scott Edmunds, Chris Hunter, Alexander Weigand, David Porco, Marzio Zapparoli, Teodor Georgiev, Daniel Mietchen, Dave Roberts, Vincent Smith


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