General Papers
iDigBio Data Integration with Self-Referential Schemas | |
Sarfaraz Ahmed Soomro, Andrea Matsunaga, José A. B. Fortes |
Natural History collections as valuable sources of biodiversity data; solution by MUSEION | |
Jiri Frank, Pavel Mlcoch |
Coupling phenotype descriptions and phylogenetic trees: from SDD to ontologies via graph databases | |
Anaïs Grand, Régine Vignes Lebbe, Eduardo Miranda, André Santanchè |
SeaIce: a Cross-Domain Crowd-Sourced Metadata Vocabulary | |
John Kunze, Jane Greenberg, Sarah Callaghan, Robert Guralnick, Greg Janee, Angela Murillo, Nassib Nassar, Christopher Patton, Karthik Ram, Jim Regetz, Tim Robertson |
Posters
Bibliography of Life: Comprehensive services for biodiversity bibliographic references | |
David King, Guido Sautter, David Morse, Lyubomir Penev, Jordan Biserkov, Teodor Georgiev, Dave Roberts, Vince Smith |
iDigBio as a Resource for the Digitization of a Billion Biodiversity Research Specimens | |
Deborah Paul, Austin R Mast, Greg Riccardi, Gil Nelson |
Agora 3D: Evaluating the Digitisation of Scientific Collections | |
Jonathan Brecko, Mathys Aurore, Patricia Mergen, Emmanuel Gilissen, Franck Theeten, Chris Vastenhoud, Erik Buelincks |
Fauna Europaea; all European animal species on the web | |
Yde de Jong, Florian Wetzel, Falko Gloeckler, Alexander Kroupa, Andreas Kohlbecker, Andreas Müller, Anton Guentsch, Gregor Hagendorn, Christoph Haueser |
FADA: Freshwater Animal Diversity Assessment | |
Aaike De Wever, Hendrik Segers, Koen Martens |
agINFRA - where agriculture, biodiversity and information technology meet | |
David Morse, Jane Bromley, David King |
Plinian Core: integrating information about species | |
Santiago Martínez de la Riva, Carmen Quesada, Francisco Pando de la Hoz, Bárbara Ayala-Orozco, Ángela M. Suárez-Mayorga, María Mora, Danny Vélez, Jose Trinidad Mendoza Gaytan, Daniel Lins da Silva, Patricia Koleff, Maria Esther Quintero Rivero, Aurelio Sanabria |
A strategy for integration of big (phenotype) data | |
Suzanna Lewis, Paula Mabee, Andy Deans, Eva Huala, Chris Mungall |
Building a mass-digitisation service infrastructure and user communities | |
Hannu Saarenmaa, Tero Mononen, Janne Karppinen, Mira Sääskilahti, Riitta Tegelberg |
BioFresh: building a collaborative global freshwater biodiversity data hub | |
Aaike De Wever, Astrid Schmidt-Kloiber, Nicolas Bailly, Vanessa Bremerich, Paul Jepson, Jörg Freyhof, Koen Martens, Klement Tockner |
ComTax: Community-driven Curation for Taxonomic Databases | |
David Morse, Hui Yang, Alistair Willis, Anne de Roeck, David King |
Interest Group
Annotations Interest Group | |
Paul J Morris |
Image Interest Group, Multimedia Resources Task Group (MRTG) Report and Discussion | |
Robert A Morris |
Symposium: Empowering International e-Collaboration for Sustainability
Long Live the Data | |
Eric T. Meyer |
Strategies and partnerships for enabling infrastructure sustainability | |
Anne Maglia |
Expanding and Sustaining Sub-Saharan African Participation and Collaboration with TDWG | |
Henry L. Bart, Patricia Mergen |
Creating a semantic framework for cultivated plants for the international e-collaboration on agrobiodiversity | |
Elizabeth Arnaud, Luca Matteis, Pankaj Jaiwal, Laurel Cooper, Selim Louafi, Pierre Larmande, Caterina Caraciolo, Johannes Keizer, Richard Bruskiewich |
Symposium Biodiversity informatics services and workflows
Provenance in Scientific Workflows: Challenges and Opportunities for Biodiversity Informatics | |
Bertram Ludaescher, Paolo Missier, David Lowery, Tianhong Song, Maureen Kelly, Sven Koehler, James Macklin, Paul Morris, Robert Morris, James Hanken |
Biodiversity Informatics Services: Fit for Use? | |
Cherian Mathew |
Improving Natural Science Collections Data through Quality Control for Research using Workflows Embedded in a FilteredPush network | |
James A Macklin, James Hanken, Maureen Kelly, Sven Koehler, David B Lowery, Bertram Ludaescher, Paul J Morris, Robert A Morris, Tianhong Song |
Using the Taverna Workflow Tool Suite for Biodiversity Research in the BioVeL Project. | |
Norman Morrison |
Symposium: Big Data coming from Earth Observation Networks
The GEOSS Brokering System | |
Paolo Mazzetti, Stefano Nativi, Mattia Santoro, Fabrizio Papeschi |
Integrated Digitized Biocollections (iDigBio) Cyberinfrastructure Status and Futures | |
Andréa Matsunaga, Renato Figueiredo, Alex Thompson, Gregory Traub, Reed Beaman, José A. B. Fortes |
Symposium: Biodiversity Data Quality – issues, methods and tools
Collaborative validation of visual data through the Pl@ntNet identification system | |
Samuel Dufour-Kowalski, Jeremy Salinier, Aurelien Peronnet, Jennifer Carré, Jean-Pascal Milcent, Hervé Goëau, Alexis Joly, Nozha Boujemaa, Pierre Bonnet, Julien Barbe, Jean-Francois Molino, Daniel Barthélémy |
Workshop: Documenting the Darwin Core
Development of proposals and documentation; Future Directions | |
James Alexander Macklin |
Symposium: Minimum Information Standards for Biological Collections: Beyond Darwin Core
World Flora Online | |
Chuck Miller |
Symposium: Building and maintaining crowd sourcing Websites and their Communities
Crowd sourcing climate change research | |
Elizabeth Ellwood, Richard Primack, Peter Everill, Jane Marsching, Matthew Shanley |
iDigBio's Public Participation in Digitization Management System | |
Austin Mast, Elizabeth Ellwood, Robert Bruhn, Greg Riccardi |
Semantics for Biodiversity - Technologies, Reasoning and Annotation
A faceted search system for facilitating the understanding and the prediction of ecosystem changes | |
Marie-Angélique Laporte, Eric Garnier, Isabelle Mougenot |
Semantic matching of interests to annotations with SPARQL queries on reasoned triples | |
Paul J Morris, James Hanken, Maureen Kelly, David Lowery, Bertram Ludäscher, James A. Macklin, Robert A Morris, Tianhong Song |
Modeling Property Values: Is SKOS Part of the Solution or Part of the Problem? Knowledge Representation Issues. | |
Robert A. Morris |
SemantEco Annotator for Linked Data Generation and Generalized Semantic Mapping | |
Patrice Seyed, Katherine Chastain, Brendan Ashby, Yue Liu, Timothy Lebo, Evan Patton, Deborah McGuinness |
Semantics for Biodiversity - Formal Models and Ontologies
Implementing a semantic mediator to integrate flower-visiting records from South African natural history museums | |
Willem Coetzer, Deshendran Moodley, Aurona Gerber |
Ontology Extraction from Unstructured Text in the Biodiversity Domain | |
Daniele Cristina Palazzi Krempser, Ana Maria Moura, Maria Luiza Machado Campos, Luiz Gadelha |
Semantics for Biodiversity - Interoperability with Genomic and Environmental semantics
The Crop Ontology: towards the semantic integration of open plant trait data | |
Elizabeth Arnaud, Luca Matteis, Pierre-Yves Chibon, Milko Skofic, Pankaj Jaiswal, Laurel Cooper, Rosemary Shrestha, Mark Wilkinson, Richard Bruskiewich, Graham McLaren |
Hierarchical Search in SemantEco Supporting Varied Ontology Design Patterns | |
Patrice Seyed, Evan Patton, Deborah McGuinness |
Semantic tools for aggregation of morphological characters across studies | |
James Balhoff, Alex Dececchi, Paula Mabee, Hilmar Lapp |
Prototyping a botanical knowledge portal | |
James Macklin, Joel Sachs, Hong Cui, Heather Cole |
Workshop: Biodiversity for Cooperation and Development
Workshop: Biodiversity for Cooperation and Development | |
Patricia Mergen |
Symposium: Mobilizing biodiversity information in Sub-Saharan Africa
OPENING UP THE AFRICAN SAVANNAH BIODIVERSITY INFORMATION | Untitled () reviewed Abstract _Patricia Merg |
Kudzai Mafuwe |
Opening Remarks | |
Patricia Mergen, Henry L. Bart |
Workshop Darwin Core Archives: beyond star schema
An iDigBio perspective on Darwin Core Archives | |
Alexander Thompson, Jose Fortes, Andrea Matsunaga |
Symposium: Developing a Names-based Architecture for Linking Biodiversity Data
The EDIT Platform for Cybertaxonomy as an information broker in name infrastructures | |
Andreas Kohlbecker, Yde de Jong, Cherian Mathew, Lorna Morris, Andreas Müller, Anton Güntsch, Walter Berendsohn |
A pan-European Species-directories Infrastructure (PESI) | |
Yde de Jong, Florian Wetzel, Gregor Hagendorn, Falko Gloeckler, Christoph Haeuser, Marc Geoffroy, Eckhard von Raab-Straube, Anton Guentsch, Walter Berendsohn, Nicola Nicolson, Alan Paton, Paul Kirk, Bart Vanhoorne, Simon Claus, Francisco (Tjess) Hernandez, Jan Mees, Christos Arvanitidis, Hannu Saarenmaa, Valerio Sbordoni, Aaike De Wever, Hendrik Segers, Ulf Gärdenfors, David King |
Workshop: Sharing and delivery of reusable phylogenetic knowledge
Sharing phylogenetic data: even more vital for morphological data | |
Ross Mounce |
Symposium: Biodiversity vocabulary management - outcomes of the VoMaG Task Group
Modeling Property Values: is SKOS part of the solution or part of the problem? | |
Robert A Morris |
Symposium: Scholarly Data Publishing in Biodiversity: Challenges and Potentials
Next generation sequencing requires next generation publishing: The Biodiversity Data Journal published the first Eukaryotic new species with a fully sequenced transcriptome, DNA barcode and microcomputed tomography | |
Lyubomir Penev, Pavel Stoev, Ana Komericki, Nesrine Akkari, Shalini Li, Xin Zhou, Scott Edmunds, Chris Hunter, Alexander Weigand, David Porco, Marzio Zapparoli, Teodor Georgiev, Daniel Mietchen, Dave Roberts, Vincent Smith |

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